PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG053780.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 161aa MW: 18127.5 Da PI: 8.0093 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 21.8 | 4.7e-07 | 8 | 34 | 29 | 55 |
AP2 29 krfslgkfgtaeeAakaaiaarkkleg 55 ++++lg+++t+++Aa+a++ a++k++g TRIDC6BG053780.4 8 ASVYLGSYDTEQKAARAYDVAALKFFG 34 789*******99***********9987 PP | |||||||
2 | AP2 | 50.7 | 4.3e-16 | 77 | 128 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++ k+grW A+I g ++ ++lg+f t+eeAa+a++ a+ +++g TRIDC6BG053780.4 77 SIYRGVTRRQKDGRWQARIGLiA---G-TRDIYLGTFKTEEEAAEAYDIAAIEIRG 128 57****************88832...2.5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MVFQYGGASV YLGSYDTEQK AARAYDVAAL KFFGLNTKLN FSISEYEKEL ADIQDMSPEE 60 CVTYLRRRSS CFSRGASIYR GVTRRQKDGR WQARIGLIAG TRDIYLGTFK TEEEAAEAYD 120 IAAIEIRGKN AVTNFDRSNY MDRGMHCIEG AGLKLLATKP E |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 66 | 87 | RRRSSCFSRGASIYRGVTRRQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 5e-48 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG053780.4 |