PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG052030.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 343aa MW: 37427 Da PI: 4.3054 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.4 | 1.6e-20 | 76 | 129 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe+++++ e+++eLA+klgL+ rqV vWFqNrRa++k TRIDC6BG052030.2 76 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWK 129 5678*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 129.2 | 1.7e-41 | 75 | 166 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqv+lLE+sFeee+kLeperK+elar+LglqprqvavWFqnrRAR+ktk lE+d+++Lk+++dal++++++L +++++L +++ TRIDC6BG052030.2 75 EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKTLERDFDRLKASFDALRADHDALLQDNHRLLSQVV 166 69*************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MEPGRLIFNT SGSGNGQMLF MDCGAGGIAG AAGVFHRGVR PVLGGMEEGR GVKRPFFTSP 60 DDMLEEEYYD EQLPEKKRRL TPEQVHLLER SFEEENKLEP ERKTELARKL GLQPRQVAVW 120 FQNRRARWKT KTLERDFDRL KASFDALRAD HDALLQDNHR LLSQVVTLTE KMQDKEAPEG 180 SFGAAVDASE PEQAAAEAEA KTSLADAEEQ AAAAEAFEVV QQQQQLHVKD EERLSPGSGG 240 SAVLDARDAL LGSGCGLAGV VDSSVDSYCF PGGAGGDEYH ECVMGPVAGG IQSEEDDGAG 300 SDEGCSYYPD DAAVFFAAAQ GHSHHHTDDD DQDDGQISYW MWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 1e-56 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG052030.2 |