PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG051820.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 387aa MW: 42227.8 Da PI: 8.1564

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG051820.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52.4	9.5e-17	138	187	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR +iN++++ Lr+llP++ ++K +Ka+ L +++eYI+ Lq TRIDC6BG051820.3 138 RSKHSATEQRRRTKINDRLDILRDLLPNC----DQKRDKASFLLEVIEYIRLLQ 187 889***********************9....9***************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MACMSRYLKS LKSLEPSNGA GNAGDGAASS APGLGEHVLP GGVGTFSIRQ VPDAQRRVEA 60 GIGREPSVSV SHGSRMEIAH EARSGIMVRS APPTPTMWQD SSTDNKRSRD TDCCECSGSR 120 AEGRSSGSSA DQDPSSPRSK HSATEQRRRT KINDRLDILR DLLPNCDQKR DKASFLLEVI 180 EYIRLLQEKC QKYESGIPEQ NNVDANCMPW DKVYYRSRWR NTQNISQAQG GGLSATTEDM 240 NKEQYSSKGI ASAPAASLFN TQSAREISTA PGSSQNIAEN SMPTNQLPWL SMSTMNQNCD 300 ASNGLLSKHD TQMPQDDSQS LSSAYSQGLL HKLKEALQKS GVDPSQTKIS VEINMDRRAR 360 ANAHIHDSSK ATEGKEPVHV AKRLRCD

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MACMSRYLKS LKSLEPSNGA GNAGDGAASS APGLGEHVLP GGVGTFSIRQ VPDAQRRVEA  60
GIGREPSVSV SHGSRMEIAH EARSGIMVRS APPTPTMWQD SSTDNKRSRD TDCCECSGSR  120
AEGRSSGSSA DQDPSSPRSK HSATEQRRRT KINDRLDILR DLLPNCDQKR DKASFLLEVI  180
EYIRLLQEKC QKYESGIPEQ NNVDANCMPW DKVYYRSRWR NTQNISQAQG GGLSATTEDM  240
NKEQYSSKGI ASAPAASLFN TQSAREISTA PGSSQNIAEN SMPTNQLPWL SMSTMNQNCD  300
ASNGLLSKHD TQMPQDDSQS LSSAYSQGLL HKLKEALQKS GVDPSQTKIS VEINMDRRAR  360
ANAHIHDSSK ATEGKEPVHV AKRLRCD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	6e-33	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG051820.3