PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG048340.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 409aa MW: 43935.9 Da PI: 9.5809

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG048340.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.3	1.3e-23	125	169	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC +++ +++k+CErH+hrgr+rsrk++e+ TRIDC6BG048340.7 125 DPEPGRCRRTDGKKWRCAKEAASDSKYCERHMHRGRNRSRKPVET 169 79****************************************997 PP
2	QLQ	61.3	2.7e-21	63	98	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ ++L++Q+l+yKyL+a++PvPp+L+++i++ TRIDC6BG048340.7 63 PFTAAQYEELEHQALIYKYLVAGVPVPPDLVLPIRR 98 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
WRCRMPLFPR QATAAPPRPP PPPSSPSAAP PRSPRKHAST ARGNGGMGEE ARMAGRWMAR 60 PAPFTAAQYE ELEHQALIYK YLVAGVPVPP DLVLPIRRGI ETLAARFYHN PLAIGYGSYL 120 GKKVDPEPGR CRRTDGKKWR CAKEAASDSK YCERHMHRGR NRSRKPVETQ LVSHSQPPAA 180 SVVPPLATGF HNHSLYPAIG GTNGGGGGGN NGMPNTFSSA LGPPQQHMGN NASSPYAALG 240 GAGTCKDFRY TAYGIRSLAD EHSQLMTEAM NTSVENPWRL PPSSQTTTFP LSSYAPQLGA 300 TSDLGQNNNS SSSNSAVKSE RQQQQQPLSF PGCGDFGGGG AMDSAKQENQ TLRPFFDEWP 360 KTRDSWSDLT DDNSSLASFS ATQLSISIPM TSSDFSAASS QSPNGMLFA

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

WRCRMPLFPR QATAAPPRPP PPPSSPSAAP PRSPRKHAST ARGNGGMGEE ARMAGRWMAR  60
PAPFTAAQYE ELEHQALIYK YLVAGVPVPP DLVLPIRRGI ETLAARFYHN PLAIGYGSYL  120
GKKVDPEPGR CRRTDGKKWR CAKEAASDSK YCERHMHRGR NRSRKPVETQ LVSHSQPPAA  180
SVVPPLATGF HNHSLYPAIG GTNGGGGGGN NGMPNTFSSA LGPPQQHMGN NASSPYAALG  240
GAGTCKDFRY TAYGIRSLAD EHSQLMTEAM NTSVENPWRL PPSSQTTTFP LSSYAPQLGA  300
TSDLGQNNNS SSSNSAVKSE RQQQQQPLSF PGCGDFGGGG AMDSAKQENQ TLRPFFDEWP  360
KTRDSWSDLT DDNSSLASFS ATQLSISIPM TSSDFSAASS QSPNGMLFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	3e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG048340.7