PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG048340.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 407aa MW: 43522.4 Da PI: 8.3481

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG048340.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.3	1.3e-23	119	163	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC +++ +++k+CErH+hrgr+rsrk++e+ TRIDC6BG048340.4 119 DPEPGRCRRTDGKKWRCAKEAASDSKYCERHMHRGRNRSRKPVET 163 79****************************************997 PP
2	QLQ	61.3	2.6e-21	57	92	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ ++L++Q+l+yKyL+a++PvPp+L+++i++ TRIDC6BG048340.4 57 PFTAAQYEELEHQALIYKYLVAGVPVPPDLVLPIRR 92 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MAMPYASLSP AGDRRSSPAA TASLLPFCRS SPFSASGNGG MGEEARMAGR WMARPAPFTA 60 AQYEELEHQA LIYKYLVAGV PVPPDLVLPI RRGIETLAAR FYHNPLAIGY GSYLGKKVDP 120 EPGRCRRTDG KKWRCAKEAA SDSKYCERHM HRGRNRSRKP VETQLVSHSQ PPAASVVPPL 180 ATGFHNHSLY PAIGGTNGGG GGGNNGMPNT FSSALGPPQQ HMGNNASSPY AALGGAGTCK 240 DFRYTAYGIR SLADEHSQLM TEAMNTSVEN PWRLPPSSQT TTFPLSSYAP QLGATSDLGQ 300 NNNSSSSNSA VKSERQQQQQ PLSFPGCGDF GGGGAMDSAK QENQTLRPFF DEWPKTRDSW 360 SDLTDDNSSL ASFSATQLSI SIPMTSSDFS AASSQSPNGM LFAGEMY

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MAMPYASLSP AGDRRSSPAA TASLLPFCRS SPFSASGNGG MGEEARMAGR WMARPAPFTA  60
AQYEELEHQA LIYKYLVAGV PVPPDLVLPI RRGIETLAAR FYHNPLAIGY GSYLGKKVDP  120
EPGRCRRTDG KKWRCAKEAA SDSKYCERHM HRGRNRSRKP VETQLVSHSQ PPAASVVPPL  180
ATGFHNHSLY PAIGGTNGGG GGGNNGMPNT FSSALGPPQQ HMGNNASSPY AALGGAGTCK  240
DFRYTAYGIR SLADEHSQLM TEAMNTSVEN PWRLPPSSQT TTFPLSSYAP QLGATSDLGQ  300
NNNSSSSNSA VKSERQQQQQ PLSFPGCGDF GGGGAMDSAK QENQTLRPFF DEWPKTRDSW  360
SDLTDDNSSL ASFSATQLSI SIPMTSSDFS AASSQSPNGM LFAGEMY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	9e-46	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG048340.4