PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG048340.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 408aa MW: 43678.6 Da PI: 8.5467

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG048340.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.3	1.3e-23	120	164	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC +++ +++k+CErH+hrgr+rsrk++e+ TRIDC6BG048340.3 120 DPEPGRCRRTDGKKWRCAKEAASDSKYCERHMHRGRNRSRKPVET 164 79****************************************997 PP
2	QLQ	61.3	2.6e-21	58	93	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ ++L++Q+l+yKyL+a++PvPp+L+++i++ TRIDC6BG048340.3 58 PFTAAQYEELEHQALIYKYLVAGVPVPPDLVLPIRR 93 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MAMPYASLSP AGDRRSSPAA TASLLPFCRS SPFSARSGNG GMGEEARMAG RWMARPAPFT 60 AAQYEELEHQ ALIYKYLVAG VPVPPDLVLP IRRGIETLAA RFYHNPLAIG YGSYLGKKVD 120 PEPGRCRRTD GKKWRCAKEA ASDSKYCERH MHRGRNRSRK PVETQLVSHS QPPAASVVPP 180 LATGFHNHSL YPAIGGTNGG GGGGNNGMPN TFSSALGPPQ QHMGNNASSP YAALGGAGTC 240 KDFRYTAYGI RSLADEHSQL MTEAMNTSVE NPWRLPPSSQ TTTFPLSSYA PQLGATSDLG 300 QNNNSSSSNS AVKSERQQQQ QPLSFPGCGD FGGGGAMDSA KQENQTLRPF FDEWPKTRDS 360 WSDLTDDNSS LASFSATQLS ISIPMTSSDF SAASSQSPNG MLFAGEMY

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MAMPYASLSP AGDRRSSPAA TASLLPFCRS SPFSARSGNG GMGEEARMAG RWMARPAPFT  60
AAQYEELEHQ ALIYKYLVAG VPVPPDLVLP IRRGIETLAA RFYHNPLAIG YGSYLGKKVD  120
PEPGRCRRTD GKKWRCAKEA ASDSKYCERH MHRGRNRSRK PVETQLVSHS QPPAASVVPP  180
LATGFHNHSL YPAIGGTNGG GGGGNNGMPN TFSSALGPPQ QHMGNNASSP YAALGGAGTC  240
KDFRYTAYGI RSLADEHSQL MTEAMNTSVE NPWRLPPSSQ TTTFPLSSYA PQLGATSDLG  300
QNNNSSSSNS AVKSERQQQQ QPLSFPGCGD FGGGGAMDSA KQENQTLRPF FDEWPKTRDS  360
WSDLTDDNSS LASFSATQLS ISIPMTSSDF SAASSQSPNG MLFAGEMY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG048340.3