PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG048340.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 415aa MW: 44530.4 Da PI: 8.5457

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG048340.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.3	1.4e-23	126	170	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC +++ +++k+CErH+hrgr+rsrk++e+ TRIDC6BG048340.2 126 DPEPGRCRRTDGKKWRCAKEAASDSKYCERHMHRGRNRSRKPVET 170 79****************************************997 PP
2	QLQ	61.3	2.7e-21	64	99	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ ++L++Q+l+yKyL+a++PvPp+L+++i++ TRIDC6BG048340.2 64 PFTAAQYEELEHQALIYKYLVAGVPVPPDLVLPIRR 99 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
DSGRERKMAM PYASLSPAGD RRSSPAATAS LLPFCRSSPF SASGNGGMGE EARMAGRWMA 60 RPAPFTAAQY EELEHQALIY KYLVAGVPVP PDLVLPIRRG IETLAARFYH NPLAIGYGSY 120 LGKKVDPEPG RCRRTDGKKW RCAKEAASDS KYCERHMHRG RNRSRKPVET QLVSHSQPPA 180 ASVVPPLATG FHNHSLYPAI GGTNGGGGGG NNGMPNTFSS ALGPPQQHMG NNASSPYAAL 240 GGAGTCKDFR YTAYGIRSLA DEHSQLMTEA MNTSVENPWR LPPSSQTTTF PLSSYAPQLG 300 ATSDLGQNNN SSSSNSAVKS ERQQQQQPLS FPGCGDFGGG GAMDSAKQEN QTLRPFFDEW 360 PKTRDSWSDL TDDNSSLASF SATQLSISIP MTSSDFSAAS SQSPNVFVVS DLYQQ

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

DSGRERKMAM PYASLSPAGD RRSSPAATAS LLPFCRSSPF SASGNGGMGE EARMAGRWMA  60
RPAPFTAAQY EELEHQALIY KYLVAGVPVP PDLVLPIRRG IETLAARFYH NPLAIGYGSY  120
LGKKVDPEPG RCRRTDGKKW RCAKEAASDS KYCERHMHRG RNRSRKPVET QLVSHSQPPA  180
ASVVPPLATG FHNHSLYPAI GGTNGGGGGG NNGMPNTFSS ALGPPQQHMG NNASSPYAAL  240
GGAGTCKDFR YTAYGIRSLA DEHSQLMTEA MNTSVENPWR LPPSSQTTTF PLSSYAPQLG  300
ATSDLGQNNN SSSSNSAVKS ERQQQQQPLS FPGCGDFGGG GAMDSAKQEN QTLRPFFDEW  360
PKTRDSWSDL TDDNSSLASF SATQLSISIP MTSSDFSAAS SQSPNVFVVS DLYQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG048340.2