PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG048220.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 257aa    MW: 28200.2 Da    PI: 4.6533
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG048220.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.88e-08227254330
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                HLH   3 rahnerErrRRdriNsafeeLrellPka 30 
                        +a+ + E+ RR++iN ++  Lr+llP++
  TRIDC6BG048220.12 227 KANFATEKERREQINVKYGALRSLLPSP 254
                        68999*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MIAEGGYFDG SRDAILMAGS LIHDSLDSIC DSTEIEQGNF HGPSFFIEDI CNPTNLTSES  60
ARTINHIQHR AEFDMDQDLH GHMIQETQVE TSNWVPAMFG TQNHIISQQS IEQQMDDYDA  120
ASYPDGAHTA APDLLNLLQI PRYSMTTAFL STEHIFGDPG QNAGNQLDIN NDVLGRAIHD  180
SGMMLGDSTL PLQYNGAAGN ILQEIDGRQF GSPKLGRSKK GGFGKAKANF ATEKERREQI  240
NVKYGALRSL LPSPTKN