PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG047470.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 321aa MW: 34577.1 Da PI: 7.3916

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG047470.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.8	4e-13	99	150	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P++ + ++ + a+i+ A++++k+L+ TRIDC6BG047470.4 99 QRMTHIAVERNRRRQMNEYLVVLRSLMPES---YVQRGDQASIVGGAIDFVKELE 150 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MALVDALCAS SVDNAALVYS TFNAAGFLFD NAAGFYDGTG IADGPALALQ AADRAPGLSA 60 AGDVAPCLEK QSTSSPAPPR RKRRRRARSC KSREETECQR MTHIAVERNR RRQMNEYLVV 120 LRSLMPESYV QRGDQASIVG GAIDFVKELE QQLQSLEAQK RTLAHYQQHK AGCDATPLPA 180 AMPTRASTSG GNACVESTSN CSSSVTEADG ASDAPPFAGF FTYPQYVWRQ SPRDATTLSA 240 DESRAGVADI EVNLVETHAS LRVMAPRRPG QLLRMVAGLQ ALRLTVLHLN VTALDSLLLY 300 SLSLKLDRSN TAALLIGEFV D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	86	RRKRRRR
2	81	85	RKRRR
3	81	88	RKRRRRAR
4	100	111	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-49	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG047470.4