PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG046710.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 387aa    MW: 43050.5 Da    PI: 9.6469
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG046710.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.12e-1373117147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6BG046710.9  73 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 117
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
DAAALRTKAN LSPPPVQRAR DRHRHPTEPG LRAFHMVSTN PPLPPALSEA AAAVSGDDAS  60
KKVRKPYTIT KSRESWTEQE HDKFLEALQL FDRDWKKIEA FVGSKTVIQI RSHAQKYFLK  120
VQKNGTSEHV PPPRPKRKAA HPYPQKASKN EPGYALKTDP SAMLRNSGMN VAVSPWTHNS  180
IPPVVASSFM KEDLGAGSMG PNIFCSSSSE GPPRAWQSGE TNDQINQVPS LRIMPDFAQV  240
YSFLGSVFDP STKGHLQKLK EMNPIDVETA LLLMRNLSIN LTSPDFEDQA VSFRCLTPYL  300
VSSRSYFFHI KKLRRISTAC SCLLELGCLF THCASIRVCP IAMVSALVLS IQIVATVQND  360
WNIWAAIMCV KSSCFANFQN YQKFGMC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.12e-85MYB_related family protein