PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG046710.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 324aa    MW: 35760.4 Da    PI: 9.93
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG046710.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.5e-1377121147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6BG046710.8  77 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 121
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
TTQADAAALR TKANLSPPPV QRARDRHRHP TEPGLRAFHM VSTNPPLPPA LSEAAAAVSG  60
DDASKKVRKP YTITKSRESW TEQEHDKFLE ALQLFDRDWK KIEAFVGSKT VIQIRSHAQK  120
YFLKVQKNGT SEHVPPPRPK RKAAHPYPQK ASKNEPGYAL KTDPSAMLRN SGMNVAVSPW  180
THNSIPPVVA SSFMKDLGAG SMGPNIFCSS SSEGPPRAWQ SGETNDQINQ VPSLRIMPDF  240
AQVYSFLGSV FDPSTKGHLQ KLKEMNPIDV ETALLLMRNL SINLTSPDFE DQRKLLSSYN  300
STSDELELGS SRSSLLTDSA LSLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.26e-90MYB_related family protein