PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG046710.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 320aa    MW: 35373 Da    PI: 9.93
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG046710.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.5e-1372116147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6BG046710.2  72 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 116
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
AAALRTKANL SPPPVQRARD RHRHPTEPGL RAFHMVSTNP PLPPALSEAA AAVSGDDASK  60
KVRKPYTITK SRESWTEQEH DKFLEALQLF DRDWKKIEAF VGSKTVIQIR SHAQKYFLKV  120
QKNGTSEHVP PPRPKRKAAH PYPQKASKNE PGYALKTDPS AMLRNSGMNV AVSPWTHNSI  180
PPVVASSFMK EDLGAGSMGP NIFCSSSSEG PPRAWQSGET NDQINQVPSL RIMPDFAQVY  240
SFLGSVFDPS TKGHLQKLKE MNPIDVETAL LLMRNLSINL TSPDFEDQRK LLSSYNSTSD  300
ELELGSSRSS LLTDSALSLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.19e-90MYB_related family protein