PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG046710.17 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 163aa MW: 18214.9 Da PI: 10.5821 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44 | 4.9e-14 | 38 | 82 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT++E++++++a +++ + Wk+I + +g +t q++s+ qky TRIDC6BG046710.17 38 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 82 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MVSTNPPLPP ALSEAAAAVS GDDASKKVRK PYTITKSRES WTEQEHDKFL EALQLFDRDW 60 KKIEAFVGSK TVIQIRSHAQ KYFLKVQKNG TSEHVPPPRP KRKAAHPYPQ KASKNEPGYA 120 LKTDPSAMLR NSGMNVAVSP WTHNSIPPVV ASSFMKGLYF KKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.2 | 1e-50 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG046710.17 |