PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG046710.16
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 158aa    MW: 17856.3 Da    PI: 10.6376
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG046710.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.14.7e-1466110147
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6BG046710.16  66 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 110
                        789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
KANLSPPPVQ RARDRHRHPT EPGLRAFHMV STNPPLPPAL SEAAAAVSGD DASKKVRKPY  60
TITKSRESWT EQEHDKFLEA LQLFDRDWKK IEAFVGSKTV IQIRSHAQKY FLKVQKNGTS  120
EHVPPPRPKR KAAHPYPQKA SKNGEARICP EDRSICHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.16e-46MYB_related family protein