PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG046710.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 327aa    MW: 36735.4 Da    PI: 9.6552
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG046710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-131458147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6BG046710.1 14 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 58
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
SKKVRKPYTI TKSRESWTEQ EHDKFLEALQ LFDRDWKKIE AFVGSKTVIQ IRSHAQKYFL  60
KVQKNGTSEH VPPPRPKRKA AHPYPQKASK NEPGYALKTD PSAMLRNSGM NVAVSPWTHN  120
SIPPVVASSF MKDLGAGSMG PNIFCSSSSE GPPRAWQSGE TNDQINQVPS LRIMPDFAQV  180
YSFLGSVFDP STKGHLQKLK EMNPIDVETA LLLMRNLSIN LTSPDFEDQA VSFRCLTPYL  240
VSSRSYFFHI KKLRRISTAC SCLLELGCLF THCASIRVCP IAMVSALVLS IQIVATVQND  300
WNIWAAIMCV KSSCFANFQN YQKFGMC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.24e-86MYB_related family protein