PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG046580.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRF | ||||||||
Protein Properties | Length: 215aa MW: 22846.7 Da PI: 10.0533 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 79 | 4.4e-25 | 137 | 180 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 ++epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr rsrk++e TRIDC6BG046580.2 137 EPEPGRCRRTDGKKWRCSRDVVQGHKYCERHVHRGRGRSRKPVE 180 69***************************************998 PP | |||||||
2 | QLQ | 53.4 | 7.8e-19 | 71 | 107 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 sa+T +Q q+L++Q+l+y+y+aa++PvP +L+++i+k TRIDC6BG046580.2 71 SALTFMQQQELEHQVLIYRYFAAGAPVPVHLVLPIWK 107 799*********************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
DEKEADSLQP PSKQPRLSSA DSNAGTCSHT RAVTTAVSSP LGLGLGLGLG GDSRGEQQAF 60 EARAAAAAAK SALTFMQQQE LEHQVLIYRY FAAGAPVPVH LVLPIWKSVS ASSFGPHRFP 120 SLIGLGSLCF DYRSSMEPEP GRCRRTDGKK WRCSRDVVQG HKYCERHVHR GRGRSRKPVE 180 GASAAPAHSG SPTTAPPRAI GFSPAGILHA THSAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36400.1 | 3e-38 | GRF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG046580.2 |