PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG046580.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 211aa MW: 22363.2 Da PI: 10.0487

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG046580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.1	4.2e-25	133	176	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 ++epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr rsrk++e TRIDC6BG046580.1 133 EPEPGRCRRTDGKKWRCSRDVVQGHKYCERHVHRGRGRSRKPVE 176 69***************************************998 PP
2	QLQ	53.4	7.6e-19	67	103	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 sa+T +Q q+L++Q+l+y+y+aa++PvP +L+++i+k TRIDC6BG046580.1 67 SALTFMQQQELEHQVLIYRYFAAGAPVPVHLVLPIWK 103 799*********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MADEKEADSL QPPSKQPRLS SADSNAGAVT TAVSSPLGLG LGLGLGGDSR GEQQAFEARA 60 AAAAAKSALT FMQQQELEHQ VLIYRYFAAG APVPVHLVLP IWKSVSASSF GPHRFPSLIG 120 LGSLCFDYRS SMEPEPGRCR RTDGKKWRCS RDVVQGHKYC ERHVHRGRGR SRKPVEGASA 180 APAHSGSPTT APPRAIGFSP AGILHATHSA T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	2e-38	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG046580.1