PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG043890.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 277aa MW: 29892.5 Da PI: 4.839

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG043890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	108.1	5.7e-34	18	103	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k+ev+aLi++r e++e+ ++ +k+plWe++s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+ql+a TRIDC6BG043890.1 18 RWPKEEVHALIQLRMEKDEHCQDMGAKGPLWEDISAGMRRIGYNRSSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLDA 103 8******************************************************************97.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
SEEGGRRGGG ESGAGMSRWP KEEVHALIQL RMEKDEHCQD MGAKGPLWED ISAGMRRIGY 60 NRSSKRCKEK WENINKYFKK VKESNKRRPE DSKTCPYFHQ LDAIYRKKQF AVNNAGGGCS 120 STASGNAVGA VNASASEQHN PWRELEGKIS NDFDRRHSVG GGSSDAPPGD GEVAAASTVL 180 DAIATNKKSE DNVMAMESNI QSQQTEVTAT DETDSDDIEG NYSDDGDDDG DEDDKMKYTI 240 EFQKHKEGGS GSAPAPATAA TVVTSSAPTG STFLAVQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	4	10	GGRRGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-46	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG043890.1