PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG043450.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 250aa    MW: 26652.3 Da    PI: 8.0257
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG043450.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY217.34.8e-67192095170
             YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee....................lleelkv 77 
                       s +eq+Cyv+Cn C++ilav vP +slfk+vtvrCGhC++llsvnl+      aa    + ++ ++                    ll ++ +
  TRIDC6BG043450.1  19 SPTEQLCYVHCNCCDAILAVGVPCSSLFKTVTVRCGHCANLLSVNLRALLLPPAAPPANQLQFGHSllsptsphglldevafqtpsLLMDQAS 111
                       578********************************************9996555555545555544555689999766666544432222222 PP

             YABBY  78 eeenlksnvekeesastsvssekl...........senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaakn 159
                       ++ +  +  +++++as+      l           +++++++++ +p ++rPPekrqrvPsaynrfik+eiqrika+nPdi+hreafsaaakn
  TRIDC6BG043450.1 112 TNLSGFTGRSNSSCASN------LpampmpaakpaQQETEQSAKSAPSANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKN 198
                       22111122222233333......1233447888744555555556677********************************************* PP

             YABBY 160 WahfPkihfgl 170
                       WahfP+ihfgl
  TRIDC6BG043450.1 199 WAHFPHIHFGL 209
                       *********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MSSSSSSSAV FNLDHLAPSP TEQLCYVHCN CCDAILAVGV PCSSLFKTVT VRCGHCANLL  60
SVNLRALLLP PAAPPANQLQ FGHSLLSPTS PHGLLDEVAF QTPSLLMDQA STNLSGFTGR  120
SNSSCASNLP AMPMPAAKPA QQETEQSAKS APSANRPPEK RQRVPSAYNR FIKDEIQRIK  180
AGNPDITHRE AFSAAAKNWA HFPHIHFGLM PDQGFKRTFK VQDGAEDMLL KDGLYAAAAA  240
AAANMSVTPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.14e-59YABBY family protein