PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG041830.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 243aa MW: 26605.8 Da PI: 6.5138

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG041830.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd lv ++q+G +W++ ++ g+ R++k+c++rw +yl TRIDC6BG041830.2 14 RGPWTAEEDMTLVAHIEQHGHSNWRALPKQAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	51.4	2.4e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ +++++++lG++ W+tIa++++ gRt++++k+ w+++l TRIDC6BG041830.2 67 RGNFTGEEEDAIIQLHAMLGNR-WSTIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRSPCCEKT GLKRGPWTAE EDMTLVAHIE QHGHSNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGNF TGEEEDAIIQ LHAMLGNRWS TIAARLPGRT DNEIKNVWHT HLKKRLDSSS 120 SKTSGQAAPK RKAKKPVAAA STADGPASMP VSSPEQPISS SATDYSMPSS LENTDSFTSE 180 EFQIEDSFWS ETLAMTVDSS GSAMEAGVTL GADSASPSSS NDEMDFWVRL FMQAGEVQSL 240 SQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	4e-79	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG041830.2