PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG041830.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 194aa    MW: 21122.4 Da    PI: 5.0575
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG041830.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding521.7e-161863148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg++T eE++ +++++++lG++ W+tIa++++ gRt++++k+ w+++l
  TRIDC6BG041830.1 18 RGNFTGEEEDAIIQLHAMLGNR-WSTIAARLP-GRTDNEIKNVWHTHL 63
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
GKSCRLRWIN YLRPDIKRGN FTGEEEDAII QLHAMLGNRW STIAARLPGR TDNEIKNVWH  60
THLKKRLDSS SSKTSGQAAP KRKAKKPVAA ASTADGPASM PVSSPEQPIS SSATDYSMPS  120
SLENTDSFTS EEFQIEDSFW SETLAMTVDS SGSAMEAGVT LGADSASPSS SNDEMDFWVR  180
LFMQAGEVQS LSQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.16e-46MYB family protein