PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG041060.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 587aa MW: 62602.8 Da PI: 6.6618

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG041060.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.9	2.8e-14	204	263	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g TRIDC6BG041060.3 204 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEDKAARAYDLAALKYWG 263 57*****************666664477446******99***********98 PP
2	AP2	45.4	2e-14	305	356	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+G +++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TRIDC6BG041060.3 305 SKYRGMTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 356 89**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MRGDLDYNGG ASELSMLVGS SAVGGKRAAM EAETEPKLED FLGGNSFVSE QDQAGGFLFS 60 GVPMATSANS NSGSNTMELS MIKSWLRNNQ VPQAPHPQSH TGAPVQQPQP HEEMSTDASA 120 SSFDALGRNG ALVVAGSSQS LALSMSTGSG SHLPMAAVGG SATGGVSEST SSENKRASGT 180 MDSPGGAVEA VARKSIDTFG QRTSIYRGVT RHRWTGRYEA HLWDNSCRRE GQSRKGRQVY 240 LGGYDKEDKA ARAYDLAALK YWGTTTTNFP INTYEKEVDE MKHMTRQEYI AYLRRNSSGF 300 SRGASKYRGM TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTE EEAAEAYDIA AIKFRGLNAV 360 TNFDMSRYDV KTILESSTLP VAVSGAARRL KEAADHPEAG ATIWRAGMDG GVISQLTDVG 420 MGAYASYHHG WPTIAFQQPS PLSVHYPYVA QPSRGWCKPE QDATVATQNL QDLQELHLGT 480 AAHNYFQASS SSTVYNGGGG GGYQQGTGGN AFLMPASAVV DEQGHSSTAT NQGSTCSYGD 540 EEGKLNIGYD AMAMASTGAD PYAAASTVSI ARANGYSNNW SSPFNGM

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MRGDLDYNGG ASELSMLVGS SAVGGKRAAM EAETEPKLED FLGGNSFVSE QDQAGGFLFS  60
GVPMATSANS NSGSNTMELS MIKSWLRNNQ VPQAPHPQSH TGAPVQQPQP HEEMSTDASA  120
SSFDALGRNG ALVVAGSSQS LALSMSTGSG SHLPMAAVGG SATGGVSEST SSENKRASGT  180
MDSPGGAVEA VARKSIDTFG QRTSIYRGVT RHRWTGRYEA HLWDNSCRRE GQSRKGRQVY  240
LGGYDKEDKA ARAYDLAALK YWGTTTTNFP INTYEKEVDE MKHMTRQEYI AYLRRNSSGF  300
SRGASKYRGM TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTE EEAAEAYDIA AIKFRGLNAV  360
TNFDMSRYDV KTILESSTLP VAVSGAARRL KEAADHPEAG ATIWRAGMDG GVISQLTDVG  420
MGAYASYHHG WPTIAFQQPS PLSVHYPYVA QPSRGWCKPE QDATVATQNL QDLQELHLGT  480
AAHNYFQASS SSTVYNGGGG GGYQQGTGGN AFLMPASAVV DEQGHSSTAT NQGSTCSYGD  540
EEGKLNIGYD AMAMASTGAD PYAAASTVSI ARANGYSNNW SSPFNGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-122	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG041060.3