PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG041060.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 658aa MW: 70042.7 Da PI: 6.0583

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG041060.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.3	1.2e-10	278	334	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g TRIDC6BG041060.2 278 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEDKAARAYDLAALKYWG 334 57*****************5444.2455535555.7799999***********98 PP
2	AP2	45.2	2.3e-14	376	427	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+G +++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TRIDC6BG041060.2 376 SKYRGMTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 427 89**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 658 aa Download sequence
MASGNDWLGF SLSGQENPQP HQDSSPPAGI DISGASDFYG LPTQPAPDAQ LGVPGHQPSY 60 GITEAFTHET HDWNMRGDLD YNGGASELSM LVGSSAVGGK RAAMEAETEP KLEDFLGGNS 120 FVSEQDQAGG FLFSGVPMAT SANSNSGSNT MELSMIKSWL RNNQVPQAPH PQSHTGAPVQ 180 QPQPHEEMST DASASSFDAL GRNGALVVAG SSQSLALSMS TGSGSHLPMA AVGGSATGGV 240 SESTSSENKR ASGTMDSPGG AVEAVARKSI DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS 300 CRREGQSRKG RQGGYDKEDK AARAYDLAAL KYWGTTTTNF PINTYEKEVD EMKHMTRQEY 360 IAYLRRNSSG FSRGASKYRG MTRHHQHGRW QARIGRVAGN KDLYLGTFST EEEAAEAYDI 420 AAIKFRGLNA VTNFDMSRYD VKTILESSTL PVAVSGAARR LKEAADHPEA GATIWRAGMD 480 GGVISQLTDV GMGAYASYHH GWPTIAFQQP SPLSVHYPYV AQPSRGWCKP EQDATVATQN 540 LQDLQELHLG TAAHNYFQAS SSSTVYNGGG GGGYQQGTGG NAFLMPASAV VDEQGHSSTA 600 TNQGSTCSYG DEEGKLNIGY DAMAMASTGA DPYAAASTVS IARANGYSNN WSSPFNGM

Sequence ? help Back to Top

Protein Sequence Length: 658 aa Download sequence

MASGNDWLGF SLSGQENPQP HQDSSPPAGI DISGASDFYG LPTQPAPDAQ LGVPGHQPSY  60
GITEAFTHET HDWNMRGDLD YNGGASELSM LVGSSAVGGK RAAMEAETEP KLEDFLGGNS  120
FVSEQDQAGG FLFSGVPMAT SANSNSGSNT MELSMIKSWL RNNQVPQAPH PQSHTGAPVQ  180
QPQPHEEMST DASASSFDAL GRNGALVVAG SSQSLALSMS TGSGSHLPMA AVGGSATGGV  240
SESTSSENKR ASGTMDSPGG AVEAVARKSI DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS  300
CRREGQSRKG RQGGYDKEDK AARAYDLAAL KYWGTTTTNF PINTYEKEVD EMKHMTRQEY  360
IAYLRRNSSG FSRGASKYRG MTRHHQHGRW QARIGRVAGN KDLYLGTFST EEEAAEAYDI  420
AAIKFRGLNA VTNFDMSRYD VKTILESSTL PVAVSGAARR LKEAADHPEA GATIWRAGMD  480
GGVISQLTDV GMGAYASYHH GWPTIAFQQP SPLSVHYPYV AQPSRGWCKP EQDATVATQN  540
LQDLQELHLG TAAHNYFQAS SSSTVYNGGG GGGYQQGTGG NAFLMPASAV VDEQGHSSTA  600
TNQGSTCSYG DEEGKLNIGY DAMAMASTGA DPYAAASTVS IARANGYSNN WSSPFNGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-116	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG041060.2