PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG041060.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 583aa MW: 62096.1 Da PI: 6.6618

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG041060.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.6	1e-10	204	260	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g TRIDC6BG041060.1 204 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEDKAARAYDLAALKYWG 260 57*****************5444.2455535555.7799999***********98 PP
2	AP2	45.4	2e-14	302	353	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+G +++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TRIDC6BG041060.1 302 SKYRGMTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 353 89**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MRGDLDYNGG ASELSMLVGS SAVGGKRAAM EAETEPKLED FLGGNSFVSE QDQAGGFLFS 60 GVPMATSANS NSGSNTMELS MIKSWLRNNQ VPQAPHPQSH TGAPVQQPQP HEEMSTDASA 120 SSFDALGRNG ALVVAGSSQS LALSMSTGSG SHLPMAAVGG SATGGVSEST SSENKRASGT 180 MDSPGGAVEA VARKSIDTFG QRTSIYRGVT RHRWTGRYEA HLWDNSCRRE GQSRKGRQGG 240 YDKEDKAARA YDLAALKYWG TTTTNFPINT YEKEVDEMKH MTRQEYIAYL RRNSSGFSRG 300 ASKYRGMTRH HQHGRWQARI GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF 360 DMSRYDVKTI LESSTLPVAV SGAARRLKEA ADHPEAGATI WRAGMDGGVI SQLTDVGMGA 420 YASYHHGWPT IAFQQPSPLS VHYPYVAQPS RGWCKPEQDA TVATQNLQDL QELHLGTAAH 480 NYFQASSSST VYNGGGGGGY QQGTGGNAFL MPASAVVDEQ GHSSTATNQG STCSYGDEEG 540 KLNIGYDAMA MASTGADPYA AASTVSIARA NGYSNNWSSP FNG

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MRGDLDYNGG ASELSMLVGS SAVGGKRAAM EAETEPKLED FLGGNSFVSE QDQAGGFLFS  60
GVPMATSANS NSGSNTMELS MIKSWLRNNQ VPQAPHPQSH TGAPVQQPQP HEEMSTDASA  120
SSFDALGRNG ALVVAGSSQS LALSMSTGSG SHLPMAAVGG SATGGVSEST SSENKRASGT  180
MDSPGGAVEA VARKSIDTFG QRTSIYRGVT RHRWTGRYEA HLWDNSCRRE GQSRKGRQGG  240
YDKEDKAARA YDLAALKYWG TTTTNFPINT YEKEVDEMKH MTRQEYIAYL RRNSSGFSRG  300
ASKYRGMTRH HQHGRWQARI GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF  360
DMSRYDVKTI LESSTLPVAV SGAARRLKEA ADHPEAGATI WRAGMDGGVI SQLTDVGMGA  420
YASYHHGWPT IAFQQPSPLS VHYPYVAQPS RGWCKPEQDA TVATQNLQDL QELHLGTAAH  480
NYFQASSSST VYNGGGGGGY QQGTGGNAFL MPASAVVDEQ GHSSTATNQG STCSYGDEEG  540
KLNIGYDAMA MASTGADPYA AASTVSIARA NGYSNNWSSP FNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-117	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG041060.1