PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG040430.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CO-like
Protein Properties Length: 300aa    MW: 31731.4 Da    PI: 4.9661
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG040430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.61e-072057438
          zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                      r C+++    ++l+C++++ +lC+ C    H g    H 
  TRIDC6BG040430.1 20 RPCDTCAVDAARLYCRSDGAYLCAGCDARAH-GagsrHA 57
                      68*****999******************999.4466675 PP
2zf-B_box23.61.1e-0759103341
          zf-B_box   3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 
                        + C+ +e+ ++   C+ +   lC++C   +H+       H++ p
  TRIDC6BG040430.1  59 VWLCEVCEHAPAAVTCRADAAALCATCDADIHSAnplasrHERLP 103
                       679*****************************6688888898876 PP
3CCT67.82.8e-23243286144
               CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                       R+a+l+RY+eKrk+R+F+K+irY+sRKa+Ae+RpR+KGrF+k++
  TRIDC6BG040430.1 243 RQARLMRYREKRKNRRFQKTIRYASRKAYAETRPRIKGRFAKRT 286
                       99***************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
EEQTVVGGGG GGGLWGLAGR PCDTCAVDAA RLYCRSDGAY LCAGCDARAH GAGSRHARVW  60
LCEVCEHAPA AVTCRADAAA LCATCDADIH SANPLASRHE RLPVTPFFGA LADPPQPNPS  120
PSSAAAMQED ADDDGSNEAE AASWLLPEPG DSPEDSAATF FADSDAYLDL DFVRSMDGIK  180
AIGVPVAPSE LDLAGGALFY PEHSMNQSMS TSEVAVVPDA LSVGGALAPA PSVAVVASKG  240
KERQARLMRY REKRKNRRFQ KTIRYASRKA YAETRPRIKG RFAKRTAEDD ALERDCNCDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24790.19e-44CO-like family protein