PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG039650.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 299aa    MW: 31426.8 Da    PI: 7.7111
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG039650.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.21.2e-12235280655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++Er RR ri +++ +L++l+P+     +k  s +++L +Ave+Ik Lq
  TRIDC6BG039650.2 235 SIAERERRTRISDKLRKLQDLVPNM----DKQTSTSDMLDLAVEHIKGLQ 280
                       689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MRRFLPAGAG EPSSSSSGPH GKHEGSEAAA AGGGLRYGGG DISLGRGNDL LHGQFRGGEG  60
EMKDDGADML ARHSSSPAGF FSNLMVDDGY HGSRGAGVAG GSEAHRNTSS STKMKSQLSF  120
TAGGPQTAAH LSRISEGASL FPGAAAHPGG EHPVSRSFSA SGSSGGFSIV GPWDESREII  180
GTLDLGGYES QFSGMASSSS LELAGMDKYM QAQQQQDQVA FKVRAKRGCA THPRSIAERE  240
RRTRISDKLR KLQDLVPNMD KQTSTSDMLD LAVEHIKGLQ SQLQAMKHEQ DKCTCCNKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.12e-44bHLH family protein