PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG038510.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 275aa    MW: 30396.8 Da    PI: 4.6511
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG038510.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1743.1e-23119240290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................................tekerrtraetrt 60 
                        Yn+YA ++GFs+++++s+k  ++g  +k++fvC+k  k+e ++                                    ++k+r++ +  +t
  TRIDC6BG038510.1 119 HYNAYALQIGFSIKMNTSRKAVKTGVLIKQQFVCNKFRKPEADDGGaekipvlddiveqtkdddededivfldddnktkkRSKKRKRDKIVQT 211
                       6************************************99999988899****************************999888888899999** PP

              FAR1  61 gCkaklkvkkekdgkwevtkleleHnHela 90 
                       gCkak++vk+  dg+wev+ ++ eHnH+l+
  TRIDC6BG038510.1 212 GCKAKMVVKLI-DGRWEVIYFVGEHNHPLV 240
                       ***********.****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MIDLNEEPDD MDIGDPVNST QQAAQNPELT GDSPTPHIVQ NATAPVAKTV ETDEQAPAAQ  60
ESETDGHTLD GTDAAGDTSV TVGNGLTGFG AENDEEAWSQ PKEPHVGMRF DTLEGAKEHY  120
NAYALQIGFS IKMNTSRKAV KTGVLIKQQF VCNKFRKPEA DDGGAEKIPV LDDIVEQTKD  180
DDEDEDIVFL DDDNKTKKRS KKRKRDKIVQ TGCKAKMVVK LIDGRWEVIY FVGEHNHPLV  240
DKPSLTKYLR SHQGIPPEEK AFLTHLHNCN LTTCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-15FAR1 family protein