PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG037320.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 315aa    MW: 35033.5 Da    PI: 6.6054
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG037320.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.32.3e-10238845
                      HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      Ed+ l + ++++G ++W  +a+ ++ gR++ qc+ rw+
  TRIDC6BG037320.9  2 EDKVLTQMINKHGLKNWQMVAHAIP-GRSAPQCRQRWR 38
                      9************************.***********8 PP
2Myb_DNA-binding39.21.6e-124789145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      + +W+++E+++l++a++ +G++ W+   ++++ gRt   +k++w+
  TRIDC6BG037320.9 47 KEAWSEQEELRLIRAHQIYGTK-WREMVKHFP-GRTNGAIKEYWR 89
                      579*******************.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEDKVLTQMI NKHGLKNWQM VAHAIPGRSA PQCRQRWRYK IDSAINKEAW SEQEELRLIR  60
AHQIYGTKWR EMVKHFPGRT NGAIKEYWRG PMKRKLNSYL SSGLLEQFPD ILENLSGTQN  120
NSLDILKGTK VSDILNDTEG LSERNEMSSA VPRISISEVS FTEVGENADV PGGESADFMY  180
ARVASAKAPE NIIARSEQHA KTRRKLDLLS SPVELKSSSH EVNSQRPLQQ REQMSPAVGG  240
VSPSNGCHDV LPKILSECAK PVLSSTGSYQ PSDVHSAGTS DPCSLELDIS DLMEMSYFDN  300
LLIFPPGSPH DGNSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.12e-37MYB family protein