PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG037320.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 449aa MW: 50181.6 Da PI: 8.8915

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG037320.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42	2.1e-13	129	172	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++eE + l + ++++G ++W +a+ ++ gR++ qc+ rw+ TRIDC6BG037320.8 129 RVKWSEEENKVLTQMINKHGLKNWQMVAHAIP-GRSAPQCRQRWR 172 789***************************.*********8 PP
2	Myb_DNA-binding	38.5	2.6e-12	181	223	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +W+++E+++l++a++ +G++ W+ ++++ gRt +k++w+ TRIDC6BG037320.8 181 KEAWSEQEELRLIRAHQIYGTK-WREMVKHFP-GRTNGAIKEYWR 223 579*****************.*****.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
LALLSPRARR QRQRASHSHP THLFLLGPLL RILHRGELRS FSRCFWRTRG FFPAMSRIGD 60 LMPRERSVKS TSHSRKADGN SANVSGTPHD IAKHCHDEEL GNIGGKLCKN DGHSFKESCS 120 ITNSEVLTRV KWSEEENKVL TQMINKHGLK NWQMVAHAIP GRSAPQCRQR WRYKIDSAIN 180 KEAWSEQEEL RLIRAHQIYG TKWREMVKHF PGRTNGAIKE YWRGPMKRKL NSYLSSGLLE 240 QFPDILENLS GTQNNSLDIL KGTKVSDILN DTEGLSERNE MSSAVPRISI SEVSFTEVGE 300 NADVPGGESA DFMYARVASA KAPENIIARS EQHAKTRRKL DLLSSPVELK SSSHEVNSQR 360 PLQQREQMSP AVGGVSPSNG CHDVLPKILS ECAKPVLSST GSYQPSDVHS AGTSDPCSLE 420 LDISDLMEMS YFDNLLIFPP GSPHDGNSI

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

LALLSPRARR QRQRASHSHP THLFLLGPLL RILHRGELRS FSRCFWRTRG FFPAMSRIGD  60
LMPRERSVKS TSHSRKADGN SANVSGTPHD IAKHCHDEEL GNIGGKLCKN DGHSFKESCS  120
ITNSEVLTRV KWSEEENKVL TQMINKHGLK NWQMVAHAIP GRSAPQCRQR WRYKIDSAIN  180
KEAWSEQEEL RLIRAHQIYG TKWREMVKHF PGRTNGAIKE YWRGPMKRKL NSYLSSGLLE  240
QFPDILENLS GTQNNSLDIL KGTKVSDILN DTEGLSERNE MSSAVPRISI SEVSFTEVGE  300
NADVPGGESA DFMYARVASA KAPENIIARS EQHAKTRRKL DLLSSPVELK SSSHEVNSQR  360
PLQQREQMSP AVGGVSPSNG CHDVLPKILS ECAKPVLSST GSYQPSDVHS AGTSDPCSLE  420
LDISDLMEMS YFDNLLIFPP GSPHDGNSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11510.1	5e-38	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG037320.8