PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG037320.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 473aa MW: 52810.6 Da PI: 9.2222

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG037320.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.9	2.3e-13	153	196	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++eE + l + ++++G ++W +a+ ++ gR++ qc+ rw+ TRIDC6BG037320.3 153 RVKWSEEENKVLTQMINKHGLKNWQMVAHAIP-GRSAPQCRQRWR 196 789***************************.*********8 PP
2	Myb_DNA-binding	38.5	2.8e-12	205	247	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +W+++E+++l++a++ +G++ W+ ++++ gRt +k++w+ TRIDC6BG037320.3 205 KEAWSEQEELRLIRAHQIYGTK-WREMVKHFP-GRTNGAIKEYWR 247 579*****************.*****.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
AKQRPWLSSD PVHHHLALLS PRARRQRQRA SHSHPTHLFL LGPLLRILHR GELRRSGLNP 60 AATAFSRCFW RTRGFFPAMS RIGDLMPRER SVKSTSHSRK ADGNSANVSG TPHDIAKHCH 120 DEELGNIGGK LCKNDGHSFK ESCSITNSEV LTRVKWSEEE NKVLTQMINK HGLKNWQMVA 180 HAIPGRSAPQ CRQRWRYKID SAINKEAWSE QEELRLIRAH QIYGTKWREM VKHFPGRTNG 240 AIKEYWRGPM KRKLNSYLSS GLLEQFPDIL ENLSGTQNNS LDILKGTKVS DILNDTEGLS 300 ERNEMSSAVP RISISEVSFT EVGENADVPG GESADFMYAR VASAKAPENI IARSEQHAKT 360 RRKLDLLSSP VELKSSSHEV NSQRPLQQRE QMSPAVGGVS PSNGCHDVLP KILSECAKPV 420 LSSTGSYQPS DVHSAGTSDP CSLELDISDL MEMSYFDNLL IFPPGSPHDG NSI

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

AKQRPWLSSD PVHHHLALLS PRARRQRQRA SHSHPTHLFL LGPLLRILHR GELRRSGLNP  60
AATAFSRCFW RTRGFFPAMS RIGDLMPRER SVKSTSHSRK ADGNSANVSG TPHDIAKHCH  120
DEELGNIGGK LCKNDGHSFK ESCSITNSEV LTRVKWSEEE NKVLTQMINK HGLKNWQMVA  180
HAIPGRSAPQ CRQRWRYKID SAINKEAWSE QEELRLIRAH QIYGTKWREM VKHFPGRTNG  240
AIKEYWRGPM KRKLNSYLSS GLLEQFPDIL ENLSGTQNNS LDILKGTKVS DILNDTEGLS  300
ERNEMSSAVP RISISEVSFT EVGENADVPG GESADFMYAR VASAKAPENI IARSEQHAKT  360
RRKLDLLSSP VELKSSSHEV NSQRPLQQRE QMSPAVGGVS PSNGCHDVLP KILSECAKPV  420
LSSTGSYQPS DVHSAGTSDP CSLELDISDL MEMSYFDNLL IFPPGSPHDG NSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11510.1	1e-37	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG037320.3