PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG036960.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 450aa MW: 48300.2 Da PI: 7.1223

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG036960.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.7	1.7e-14	99	180	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W++ + +Li+a e+ +l+rg+l+ p+W+ev++++ ++ g+++ s +qCk++++ l+k+yk +k+ + + ++p+fd+l+ TRIDC6BG036960.1 99 WSDGATSTLIDAWGERFVALGRGSLRHPQWQEVAEVVsSRDGYSKppkSDVQCKNRIDTLKKKYKVEKAKSDS-------SWPFFDRLD 180 ***********************************87889976333778***********9998886.......5***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
PHATKCKCIP NNSASWKYPQ TLARRRPTTS RSPLMDDDGA ASPSPSPSPS RSPSPLPIAD 60 PVTVAAVPPG HLALAIPIHK HGPSNGGGGG GGGGREDAWS DGATSTLIDA WGERFVALGR 120 GSLRHPQWQE VAEVVSSRDG YSKPPKSDVQ CKNRIDTLKK KYKVEKAKSD SSWPFFDRLD 180 FLLAPVQKLL GNSGGPAGNS GSNPNNRSTA PMAPRVNFPQ RTRTAFPSSG MKRRLPSPPQ 240 ASASSESSDG FPPEPLAEAV NGKRQRLEES ANGADSSDRA QGLRDLAQAI RRLGETYERV 300 ESSKGEHELR MERNRLDAAR ELEDQRVQFF LKMQMEISKA NNGAPLAVPL AAAAMVGNSA 360 STAEDGDSPA TADGNGPRRA SMATDVMASS NHHVRYRVKD DRHHHASQRP SYLYNENNVV 420 AADAGGIGSG SDSSNKEDEE EMEDEEEESQ

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

PHATKCKCIP NNSASWKYPQ TLARRRPTTS RSPLMDDDGA ASPSPSPSPS RSPSPLPIAD  60
PVTVAAVPPG HLALAIPIHK HGPSNGGGGG GGGGREDAWS DGATSTLIDA WGERFVALGR  120
GSLRHPQWQE VAEVVSSRDG YSKPPKSDVQ CKNRIDTLKK KYKVEKAKSD SSWPFFDRLD  180
FLLAPVQKLL GNSGGPAGNS GSNPNNRSTA PMAPRVNFPQ RTRTAFPSSG MKRRLPSPPQ  240
ASASSESSDG FPPEPLAEAV NGKRQRLEES ANGADSSDRA QGLRDLAQAI RRLGETYERV  300
ESSKGEHELR MERNRLDAAR ELEDQRVQFF LKMQMEISKA NNGAPLAVPL AAAAMVGNSA  360
STAEDGDSPA TADGNGPRRA SMATDVMASS NHHVRYRVKD DRHHHASQRP SYLYNENNVV  420
AADAGGIGSG SDSSNKEDEE EMEDEEEESQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11100.1	1e-40	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG036960.1