PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG036120.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 449aa MW: 48939.6 Da PI: 5.0143

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG036120.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.8	3.2e-27	146	211	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+irwkg TRIDC6BG036120.9 146 RYDSSLGLLTKKFINLLKQAEDGILDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWKG 211 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MSGGGRPPAA QKILQSLRPP PVFSTPSRPP FASPDDYHRF HAPTTPSATG SGGIGAGGVG 60 GDIDEGIVIR TQLKRKATRE ENNAAESSDC MIVTTGVTGN PLLTPVSGKA VKNSKSKTKN 120 NKAGPQTPTP NVGSPLNPST PAGTCRYDSS LGLLTKKFIN LLKQAEDGIL DLNNAAETLE 180 VQKRRIYDIT NVLEGIGLIE KTLKNRIRWK GLDDSGVELD NGLSGLQEQA LDERISDMRE 240 KLRGLTEDEN SQRWLYVTED DIKGLPCFQN ETLIAIKAPH GTTLEVPDPD EAGDYLQRRY 300 RIVLRSTLGP IDVYLVSQFD DGFENLGGAA TPPRHTNVPK SGPCEDLHAT NATQSSKSIN 360 VEYNIQHRQN TPQDPSSSND YGGMTRIIPS DVNTDADYWL LTEGDVSITD MWETAPEVQW 420 DTAVFLPEDV STPHAHHRPR MQVPSMDQP

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MSGGGRPPAA QKILQSLRPP PVFSTPSRPP FASPDDYHRF HAPTTPSATG SGGIGAGGVG  60
GDIDEGIVIR TQLKRKATRE ENNAAESSDC MIVTTGVTGN PLLTPVSGKA VKNSKSKTKN  120
NKAGPQTPTP NVGSPLNPST PAGTCRYDSS LGLLTKKFIN LLKQAEDGIL DLNNAAETLE  180
VQKRRIYDIT NVLEGIGLIE KTLKNRIRWK GLDDSGVELD NGLSGLQEQA LDERISDMRE  240
KLRGLTEDEN SQRWLYVTED DIKGLPCFQN ETLIAIKAPH GTTLEVPDPD EAGDYLQRRY  300
RIVLRSTLGP IDVYLVSQFD DGFENLGGAA TPPRHTNVPK SGPCEDLHAT NATQSSKSIN  360
VEYNIQHRQN TPQDPSSSND YGGMTRIIPS DVNTDADYWL LTEGDVSITD MWETAPEVQW  420
DTAVFLPEDV STPHAHHRPR MQVPSMDQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-113	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG036120.9