PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG036120.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 445aa MW: 48729.2 Da PI: 4.7629

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG036120.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.8	3.2e-27	133	198	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+irwkg TRIDC6BG036120.3 133 RYDSSLGLLTKKFINLLKQAEDGILDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWKG 198 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
LQSLRPPPVF STPSRPPFAS PDDYHRFHAP TTPSATGSGG IGAGGVGGDI DEGIVIRTQL 60 KRKATREENN AAESSDCMIV TTGVTGNPLL TPVSGKAVKN SKSKTKNNKA GPQTPTPNVG 120 SPLNPSTPAG TCRYDSSLGL LTKKFINLLK QAEDGILDLN NAAETLEVQK RRIYDITNVL 180 EGIGLIEKTL KNRIRWKGLD DSGVELDNGL SGLQTEVENL NLQEQALDER ISDMREKLRG 240 LTEDENSQRW LYVTEDDIKG LPCFQNETLI AIKAPHGTTL EVPDPDEAGD YLQRRYRIVL 300 RSTLGPIDVY LVSQFDDGFE NLGGAATPPR HTNVPKSGPC EDLHATNATQ SSKSINVEYN 360 IQHRQNTPQD PSSSNDYGGM TRIIPSDVNT DADYWLLTEG DVSITDMWET APEVQWDTAV 420 FLPEDVSTPH AHHRPRMQVP SMDQP

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

LQSLRPPPVF STPSRPPFAS PDDYHRFHAP TTPSATGSGG IGAGGVGGDI DEGIVIRTQL  60
KRKATREENN AAESSDCMIV TTGVTGNPLL TPVSGKAVKN SKSKTKNNKA GPQTPTPNVG  120
SPLNPSTPAG TCRYDSSLGL LTKKFINLLK QAEDGILDLN NAAETLEVQK RRIYDITNVL  180
EGIGLIEKTL KNRIRWKGLD DSGVELDNGL SGLQTEVENL NLQEQALDER ISDMREKLRG  240
LTEDENSQRW LYVTEDDIKG LPCFQNETLI AIKAPHGTTL EVPDPDEAGD YLQRRYRIVL  300
RSTLGPIDVY LVSQFDDGFE NLGGAATPPR HTNVPKSGPC EDLHATNATQ SSKSINVEYN  360
IQHRQNTPQD PSSSNDYGGM TRIIPSDVNT DADYWLLTEG DVSITDMWET APEVQWDTAV  420
FLPEDVSTPH AHHRPRMQVP SMDQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-120	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG036120.3