PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG035690.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 702aa MW: 77837.8 Da PI: 9.7746

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG035690.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.2	1.2e-14	646	702	1	57
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenl 57 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l TRIDC6BG035690.9 646 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSL 702 7***************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence
MQGLCSQTTT SLVCKRLFLT QLSSRNGATK LKQLLLHMAM KITSVIPALD STTPIFASSF 60 TMELIKKRLK EFGIFLSSRL KSFRVRNRFQ AGPFEVEPIR VTHSIPDCCG LVLRCGDGTI 120 FHTGDWKIDE SPVDGRIFDR EALEELSKEG VTLMMSDSTN ILSPGRSTSE SVVASSLLRH 180 VSEAKGRRVI TTQFASNIHR IGSIKAAADL TGRRLVFVGM SLRTYLEAAF RDGKAPLDPS 240 TLVKAEDMDA YDPKNLLVVT TGSQAEPRAA LNLASYGGSH ALKLCKEDVL LYSAKVIPGN 300 ESRVMKMLNR LTDLGPKIVM GKDAGLHTSG HAYHDELEEV LQIVKPQHFL PVHGELLFLK 360 EHELLGRSTG IKHTTVIKNG EMLGVSHLRN RKVLSNGFVS LGKQDFKLMY SDGDKAFGTS 420 TDLCIDERFR IASDGIIFVS MEIFRPKPAS PQSGLKGKFK ITTRCLWLDN GRLLDALYKA 480 AHAALSSCPL NCPLSHMERM VSEILRKMVR KYSGKRPDVI VVASENTTVG FSEEVINRHM 540 SLDYEKTRPE NPEREAEESI PEVMRTTPDD ATTSSNGESF FSPDLHQPKT LDHFWESFKS 600 PTAVKIARIV NASAQGNKPK LGKISIIDKD SSTSAPAAAK SSRKNKWKPE EIKSLIQLRG 660 EMNEKFQTVK GRMVLWEEIS GSLLKQGITR TPAQCKSVWT SL

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence

MQGLCSQTTT SLVCKRLFLT QLSSRNGATK LKQLLLHMAM KITSVIPALD STTPIFASSF  60
TMELIKKRLK EFGIFLSSRL KSFRVRNRFQ AGPFEVEPIR VTHSIPDCCG LVLRCGDGTI  120
FHTGDWKIDE SPVDGRIFDR EALEELSKEG VTLMMSDSTN ILSPGRSTSE SVVASSLLRH  180
VSEAKGRRVI TTQFASNIHR IGSIKAAADL TGRRLVFVGM SLRTYLEAAF RDGKAPLDPS  240
TLVKAEDMDA YDPKNLLVVT TGSQAEPRAA LNLASYGGSH ALKLCKEDVL LYSAKVIPGN  300
ESRVMKMLNR LTDLGPKIVM GKDAGLHTSG HAYHDELEEV LQIVKPQHFL PVHGELLFLK  360
EHELLGRSTG IKHTTVIKNG EMLGVSHLRN RKVLSNGFVS LGKQDFKLMY SDGDKAFGTS  420
TDLCIDERFR IASDGIIFVS MEIFRPKPAS PQSGLKGKFK ITTRCLWLDN GRLLDALYKA  480
AHAALSSCPL NCPLSHMERM VSEILRKMVR KYSGKRPDVI VVASENTTVG FSEEVINRHM  540
SLDYEKTRPE NPEREAEESI PEVMRTTPDD ATTSSNGESF FSPDLHQPKT LDHFWESFKS  600
PTAVKIARIV NASAQGNKPK LGKISIIDKD SSTSAPAAAK SSRKNKWKPE EIKSLIQLRG  660
EMNEKFQTVK GRMVLWEEIS GSLLKQGITR TPAQCKSVWT SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG035690.9