PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG035690.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 819aa MW: 90589.3 Da PI: 9.2855

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG035690.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.9	1.5e-14	763	819	1	57
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenl 57 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l TRIDC6BG035690.8 763 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSL 819 7***************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 819 aa Download sequence
ARAAAMVALA SLSSLCLCGA ARRRSASAPT SISCCMLATP SGRGSHESRI PRRRFRRTEG 60 ATKSMEDSVK RKMEQFYEGV DGPPLRVLPI GGLGEIGMNC MLVGNCDRYI LIDAGVMFPD 120 YDEFGVQKII PDTTFIKKWS HKIEAVIITH GHEDHIGALP WVIPALDSTT PIFASSFTME 180 LIKKRLKEFG IFLSSRLKSF RVRNRFQAGP FEVEPIRVTH SIPDCCGLVL RCGDGTIFHT 240 GDWKIDESPV DGRIFDREAL EELSKEGVTL MMSDSTNILS PGRSTSESVV ASSLLRHVSE 300 AKGRRVITTQ FASNIHRIGS IKAAADLTGR RLVFVGMSLR TYLEAAFRDG KAPLDPSTLV 360 KAEDMDAYDP KNLLVVTTGS QAEPRAALNL ASYGGSHALK LCKEDVLLYS AKVIPGNESR 420 VMKMLNRLTD LGPKIVMGKD AGLHTSGHAY HDELEEVLQI VKPQHFLPVH GELLFLKEHE 480 LLGRSTGIKH TTVIKNGEML GVSHLRNRKV LSNGFVSLGK QDFKLMYSDG DKAFGTSTDL 540 CIDERFRIAS DGIIFVSMEI FRPKPASPQS GLKGKFKITT RCLWLDNGRL LDALYKAAHA 600 ALSSCPLNCP LSHMERMVSE ILRKMVRKYS GKRPDVIVVA SENTTVGFSE EVINRHMSLD 660 YEKTRPENPE REAEESIPEV MRTTPDDATT SSNGESFFSP DLHQPKTLDH FWESFKSPTA 720 VKIARIVNAS AQGNKPKLGK ISIIDKDSST SAPAAAKSSR KNKWKPEEIK SLIQLRGEMN 780 EKFQTVKGRM VLWEEISGSL LKQGITRTPA QCKSVWTSL

Sequence ? help Back to Top

Protein Sequence Length: 819 aa Download sequence

ARAAAMVALA SLSSLCLCGA ARRRSASAPT SISCCMLATP SGRGSHESRI PRRRFRRTEG  60
ATKSMEDSVK RKMEQFYEGV DGPPLRVLPI GGLGEIGMNC MLVGNCDRYI LIDAGVMFPD  120
YDEFGVQKII PDTTFIKKWS HKIEAVIITH GHEDHIGALP WVIPALDSTT PIFASSFTME  180
LIKKRLKEFG IFLSSRLKSF RVRNRFQAGP FEVEPIRVTH SIPDCCGLVL RCGDGTIFHT  240
GDWKIDESPV DGRIFDREAL EELSKEGVTL MMSDSTNILS PGRSTSESVV ASSLLRHVSE  300
AKGRRVITTQ FASNIHRIGS IKAAADLTGR RLVFVGMSLR TYLEAAFRDG KAPLDPSTLV  360
KAEDMDAYDP KNLLVVTTGS QAEPRAALNL ASYGGSHALK LCKEDVLLYS AKVIPGNESR  420
VMKMLNRLTD LGPKIVMGKD AGLHTSGHAY HDELEEVLQI VKPQHFLPVH GELLFLKEHE  480
LLGRSTGIKH TTVIKNGEML GVSHLRNRKV LSNGFVSLGK QDFKLMYSDG DKAFGTSTDL  540
CIDERFRIAS DGIIFVSMEI FRPKPASPQS GLKGKFKITT RCLWLDNGRL LDALYKAAHA  600
ALSSCPLNCP LSHMERMVSE ILRKMVRKYS GKRPDVIVVA SENTTVGFSE EVINRHMSLD  660
YEKTRPENPE REAEESIPEV MRTTPDDATT SSNGESFFSP DLHQPKTLDH FWESFKSPTA  720
VKIARIVNAS AQGNKPKLGK ISIIDKDSST SAPAAAKSSR KNKWKPEEIK SLIQLRGEMN  780
EKFQTVKGRM VLWEEISGSL LKQGITRTPA QCKSVWTSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG035690.8