PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG035690.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 259aa MW: 28958.2 Da PI: 9.4296 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 48.8 | 1.8e-15 | 201 | 257 | 1 | 57 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenl 57 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l TRIDC6BG035690.5 201 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSL 257 7*****************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MYSDGDKAFG TSTDLCIDER FRIASDGIIF VSMEIFRPKP ASPQSGLKGK FKITTRCLWL 60 DNGRLLDALY KAAHAALSSC PLNCPLSHME RMVSEILRKM VRKYSGKRPD VIVVASENTT 120 VGFSEEVINR HMSLDYEKTR PENPEREAEE SIPEVMRTTP DDATTSSNAQ GNKPKLGKIS 180 IIDKDSSTSA PAAAKSSRKN KWKPEEIKSL IQLRGEMNEK FQTVKGRMVL WEEISGSLLK 240 QGITRTPAQC KSVWTSLLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63420.1 | 7e-51 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG035690.5 |