PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG035690.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 840aa MW: 93057.3 Da PI: 9.3608

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG035690.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.1	7.1e-16	776	836	1	61
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkry 61 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l ++y TRIDC6BG035690.3 776 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSLLQKY 836 7********************************************************9999 PP

Sequence ? help Back to Top
Protein Sequence Length: 840 aa Download sequence
MVALASLSSL CLCGAARRRS ASAPTSISCC MLATPSGRGS HESRIPRRRF RRTEGATKSM 60 EDSVKRKMEQ FYEGVDGPPL RVLPIGGLGE IGMNCMLVGN CDRYILIDAG VMFPDYDEFG 120 VQKIIPDTTF IKKWSHKIEA VIITHGHEDH IGALPWVIPA LDSTTPIFAS SFTMELIKKR 180 LKEFGIFLSS RLKSFRVRNR FQAGPFEVEP IRVTHSIPDC CGLVLRCGDG TIFHTGDWKI 240 DESPVDGRIF DREALEELSK EGVTLMMSDS TNILSPGRST SESVVASSLL RHVSEAKGRR 300 VITTQFASNI HRIGSIKAAA DLTGRRLVFV GMSLRTYLEA AFRDGKAPLD PSTLVKAEDM 360 DAYDPKNLLV VTTGSQAEPR AALNLASYGG SHALKLCKED VLLYSAKVIP GNESRVMKML 420 NRLTDLGPKI VMGKDAGLHT SGHAYHDELE EVLQIVKPQH FLPVHGELLF LKEHELLGRS 480 TGIKHTTVIK NGEMLGVSHL RNRKVLSNGF VSLGKQDFKL MYSDGDKAFG TSTDLCIDER 540 FRIASDGIIF VSMEIFRPKP ASPQSGLKGK FKITTRCLWL DNGRLLDALY KAAHAALSSC 600 PLNCPLSHME RMVSEILRKM VRKYSGKRPD VIVVASENTT VGFSEEVINR HMSLDYEKTR 660 PENPEREAEG MKRCGSIRAN DVITLFAESI PEVMRTTPDD ATTSSNGESF FSPDLHQPKT 720 LDHFWESFKS PTAVKIARIV NASAQGNKPK LGKISIIDKD SSTSAPAAAK SSRKNKWKPE 780 EIKSLIQLRG EMNEKFQTVK GRMVLWEEIS GSLLKQGITR TPAQCKSVWT SLLQKYEVGR

Sequence ? help Back to Top

Protein Sequence Length: 840 aa Download sequence

MVALASLSSL CLCGAARRRS ASAPTSISCC MLATPSGRGS HESRIPRRRF RRTEGATKSM  60
EDSVKRKMEQ FYEGVDGPPL RVLPIGGLGE IGMNCMLVGN CDRYILIDAG VMFPDYDEFG  120
VQKIIPDTTF IKKWSHKIEA VIITHGHEDH IGALPWVIPA LDSTTPIFAS SFTMELIKKR  180
LKEFGIFLSS RLKSFRVRNR FQAGPFEVEP IRVTHSIPDC CGLVLRCGDG TIFHTGDWKI  240
DESPVDGRIF DREALEELSK EGVTLMMSDS TNILSPGRST SESVVASSLL RHVSEAKGRR  300
VITTQFASNI HRIGSIKAAA DLTGRRLVFV GMSLRTYLEA AFRDGKAPLD PSTLVKAEDM  360
DAYDPKNLLV VTTGSQAEPR AALNLASYGG SHALKLCKED VLLYSAKVIP GNESRVMKML  420
NRLTDLGPKI VMGKDAGLHT SGHAYHDELE EVLQIVKPQH FLPVHGELLF LKEHELLGRS  480
TGIKHTTVIK NGEMLGVSHL RNRKVLSNGF VSLGKQDFKL MYSDGDKAFG TSTDLCIDER  540
FRIASDGIIF VSMEIFRPKP ASPQSGLKGK FKITTRCLWL DNGRLLDALY KAAHAALSSC  600
PLNCPLSHME RMVSEILRKM VRKYSGKRPD VIVVASENTT VGFSEEVINR HMSLDYEKTR  660
PENPEREAEG MKRCGSIRAN DVITLFAESI PEVMRTTPDD ATTSSNGESF FSPDLHQPKT  720
LDHFWESFKS PTAVKIARIV NASAQGNKPK LGKISIIDKD SSTSAPAAAK SSRKNKWKPE  780
EIKSLIQLRG EMNEKFQTVK GRMVLWEEIS GSLLKQGITR TPAQCKSVWT SLLQKYEVGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG035690.3