PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG035690.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 388aa    MW: 43440 Da    PI: 9.7323
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG035690.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix33.51.1e-10342388147
           trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergfersp 47 
                        +W+ +e++ Li++r em+e++++ k ++ lWee+s  + ++g++r+p
  TRIDC6BG035690.11 342 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTP 388
                        7********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MKMLNRLTDL GPKIVMGKDA GLHTSGHAYH DELEEVLQIV KPQHFLPVHG ELLFLKEHEL  60
LGRSTGIKHT TVIKNGEMLG VSHLRNRKVL SNGFVSLGKQ DFKLMYSDGD KAFGTSTDLC  120
IDERFRIASD GIIFVSMEIF RPKPASPQSG LKGKFKITTR CLWLDNGRLL DALYKAAHAA  180
LSSCPLNCPL SHMERMVSEI LRKMVRKYSG KRPDVIVVAS ENTTVGFSEE VINRHMSLDY  240
EKTRPENPER EAEESIPEVM RTTPDDATTS SNGESFFSPD LHQPKTLDHF WESFKSPTAV  300
KIARIVNASA QGNKPKLGKI SIIDKDSSTS APAAAKSSRK NKWKPEEIKS LIQLRGEMNE  360
KFQTVKGRMV LWEEISGSLL KQGITRTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63420.11e-134Trihelix family protein