PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG035690.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 483aa MW: 53679.7 Da PI: 9.3624

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG035690.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.9	7.4e-15	427	483	1	57
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenl 57 +W+ +e++ Li++r em+e++++ k ++ lWee+s + ++g++r+p qCk+ w +l TRIDC6BG035690.10 427 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSL 483 7***************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MSLRTYLEAA FRDGKAPLDP STLVKAEDMD AYDPKNLLVV TTGSQAEPRA ALNLASYGGS 60 HALKLCKEDV LLYSAKVIPG NESRVMKMLN RLTDLGPKIV MGKDAGLHTS GHAYHDELEE 120 VLQIVKPQHF LPVHGELLFL KEHELLGRST GIKHTTVIKN GEMLGVSHLR NRKVLSNGFV 180 SLGKQDFKLM YSDGDKAFGT STDLCIDERF RIASDGIIFV SMEIFRPKPA SPQSGLKGKF 240 KITTRCLWLD NGRLLDALYK AAHAALSSCP LNCPLSHMER MVSEILRKMV RKYSGKRPDV 300 IVVASENTTV GFSEEVINRH MSLDYEKTRP ENPEREAEES IPEVMRTTPD DATTSSNGES 360 FFSPDLHQPK TLDHFWESFK SPTAVKIARI VNASAQGNKP KLGKISIIDK DSSTSAPAAA 420 KSSRKNKWKP EEIKSLIQLR GEMNEKFQTV KGRMVLWEEI SGSLLKQGIT RTPAQCKSVW 480 TSL

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MSLRTYLEAA FRDGKAPLDP STLVKAEDMD AYDPKNLLVV TTGSQAEPRA ALNLASYGGS  60
HALKLCKEDV LLYSAKVIPG NESRVMKMLN RLTDLGPKIV MGKDAGLHTS GHAYHDELEE  120
VLQIVKPQHF LPVHGELLFL KEHELLGRST GIKHTTVIKN GEMLGVSHLR NRKVLSNGFV  180
SLGKQDFKLM YSDGDKAFGT STDLCIDERF RIASDGIIFV SMEIFRPKPA SPQSGLKGKF  240
KITTRCLWLD NGRLLDALYK AAHAALSSCP LNCPLSHMER MVSEILRKMV RKYSGKRPDV  300
IVVASENTTV GFSEEVINRH MSLDYEKTRP ENPEREAEES IPEVMRTTPD DATTSSNGES  360
FFSPDLHQPK TLDHFWESFK SPTAVKIARI VNASAQGNKP KLGKISIIDK DSSTSAPAAA  420
KSSRKNKWKP EEIKSLIQLR GEMNEKFQTV KGRMVLWEEI SGSLLKQGIT RTPAQCKSVW  480
TSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG035690.10