PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG033360.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 537aa MW: 57760.1 Da PI: 8.4929

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG033360.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.7	1.3e-10	385	427	5	52
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 h + ErrRR+r+N++fe Lr llP+ K +Ka++L + +Y++ TRIDC6BG033360.1 385 HMISERRRRERLNESFEALRGLLPPG-----SKKDKATVLANTLDYMN 427 8899******************95.....499**********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MMDTLFVLGQ ESRLRILQQA ASRVPACAYL CVWAPIPAGG HRPTPPFTAA NSMSRARRQL 60 LCLDAWLRDG GSGDVDRERA LFDAYRGSLC AAVSGCVPGW AYEDGRAYME LSEHELAASA 120 SSPVQLQFYQ EAGIKVAAFM GCESGEIEVG MSTPAGQMNL QAGLGQIFSE DFFQQSLLEE 180 LLQLPPTRPS SSSSSLPSIS VDSPADGSTS LLRTMAMSSS TTTSPRDLTA APLPHPPRPP 240 HPVPFSRHGP AHVHGHVHFP SPEADDVAMA QAMLAVISAS SSSSSAMPTT STPPLGYRRA 300 HRSPRRGSTT TAFRPYNAAL APRAPRRASD APGQRMIKMG ISILRRMNTL NNNGQERTTG 360 TTMQRWREED EEAAPPAPTS SQLHHMISER RRRERLNESF EALRGLLPPG SKKDKATVLA 420 NTLDYMNILI AQISELEARN RSLETAAQIQ QHQRVTNGNS RDRPDEAALQ AGGTSKRVQV 480 EVATGSAGAS TSSSSFSTGQ CREVTIRVAA AGDLSDLVAR VLALLKDTAG HRFSVVA

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MMDTLFVLGQ ESRLRILQQA ASRVPACAYL CVWAPIPAGG HRPTPPFTAA NSMSRARRQL  60
LCLDAWLRDG GSGDVDRERA LFDAYRGSLC AAVSGCVPGW AYEDGRAYME LSEHELAASA  120
SSPVQLQFYQ EAGIKVAAFM GCESGEIEVG MSTPAGQMNL QAGLGQIFSE DFFQQSLLEE  180
LLQLPPTRPS SSSSSLPSIS VDSPADGSTS LLRTMAMSSS TTTSPRDLTA APLPHPPRPP  240
HPVPFSRHGP AHVHGHVHFP SPEADDVAMA QAMLAVISAS SSSSSAMPTT STPPLGYRRA  300
HRSPRRGSTT TAFRPYNAAL APRAPRRASD APGQRMIKMG ISILRRMNTL NNNGQERTTG  360
TTMQRWREED EEAAPPAPTS SQLHHMISER RRRERLNESF EALRGLLPPG SKKDKATVLA  420
NTLDYMNILI AQISELEARN RSLETAAQIQ QHQRVTNGNS RDRPDEAALQ AGGTSKRVQV  480
EVATGSAGAS TSSSSFSTGQ CREVTIRVAA AGDLSDLVAR VLALLKDTAG HRFSVVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	389	394	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	6e-14	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG033360.1