PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG031580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 23323 Da PI: 4.8232 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 42.9 | 1.2e-13 | 77 | 121 | 5 | 52 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 GV + + +g+++AeIrd + + r++lg+f+t+e Aa a+++a+ TRIDC6BG031580.1 77 GVPRGP-WGKYAAEIRDSTR---SgERVWLGTFDTPEAAALAYDQAAYT 121 887778.**********322...35*********************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
AADDDIAPYP QQQQPQYLNF GGSSYQYDGA ASAMGMGMDM DQFSALMEAT SISPAAPSWA 60 EQHEAKKANA ESPQLIGVPR GPWGKYAAEI RDSTRSGERV WLGTFDTPEA AALAYDQAAY 120 TSRGTAAVLN FPVERVRESL RVLKLGEAAD AGKDDSPVLA LKRRHCIRKR TPKGKGQGDM 180 KKKQPAAAAA SSVLELEDLG ADYLEELLAL SEQWSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG031580.1 |