PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG030130.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 200aa    MW: 20610.1 Da    PI: 6.5001
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG030130.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-192069255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +++GVr ++ +gr++AeIrdp    k++r++lg+f++ae+Aa+a++aa++ l+g
  TRIDC6BG030130.2 20 RFRGVRKRP-WGRYAAEIRDPA---KKARVWLGTFDSAEDAARAYDAAARMLRG 69
                      69*******.**********83...36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
GGAATAVAAA AEAEGDAGAR FRGVRKRPWG RYAAEIRDPA KKARVWLGTF DSAEDAARAY  60
DAAARMLRGP KAKTNFPLSL PHHHQLPPSY SPYPAAAVPT SVAAAAARPA CSSLSSTVES  120
FGGPRARPVL PPRPPPPPIL DGDCHSDCGS SASVVDDDCA DAAASPSCGA LLPFDLNLPP  180
EFGGVACNDD DELKLTALRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-20ERF family protein