PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG027860.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YC | ||||||||
Protein Properties | Length: 256aa MW: 28306.9 Da PI: 4.6014 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 175.8 | 4.4e-55 | 78 | 182 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 ql+ fw++q ie+atdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdi+d TRIDC6BG027860.3 78 QLREFWATQmeeIEQATDFKNHTLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYD 170 89*****996677899***************************************************************************** PP NF-YC 91 flvdivprdelk 102 flvdi+prd++k TRIDC6BG027860.3 171 FLVDIIPRDDMK 182 *********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MEPSSQPEPV VGVATAGSQA YPPPAAYPAP AMPAAIPPGS QPAVPFPANP AQLSAQHQLV 60 YQQAQQFHQQ LQQQQQQQLR EFWATQMEEI EQATDFKNHT LPLARIKKIM KADEDVRMIS 120 AEAPVVFAKA CEVFILELTL RSWMHTEENK RRTLQKNDIA AAITRTDIYD FLVDIIPRDD 180 MKEEGLGLPR VGLPPAALGA PADAYPPYYY VPAQQVPGVG MMYGGQQGHP VAYAWQQPQG 240 QQAEEAPEEQ QQSPSN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 157 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 1e-65 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG027860.3 |