PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG027860.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 276aa    MW: 30666.6 Da    PI: 5.6333
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG027860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC175.55.2e-55982021102
             NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 
                       ql+ fw++q   ie+atdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdi+d
  TRIDC6BG027860.1  98 QLREFWATQmeeIEQATDFKNHTLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYD 190
                       89*****996677899***************************************************************************** PP

             NF-YC  91 flvdivprdelk 102
                       flvdi+prd++k
  TRIDC6BG027860.1 191 FLVDIIPRDDMK 202
                       *********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
RRSGGSRDWK IFGFARTRSH MEPSSQPEPV VGVATAGSQA YPPPAAYPAP AMPAAIPPGS  60
QPAVPFPANP AQLSAQHQLV YQQAQQFHQQ LQQQQQQQLR EFWATQMEEI EQATDFKNHT  120
LPLARIKKIM KADEDVRMIS AEAPVVFAKA CEVFILELTL RSWMHTEENK RRTLQKNDIA  180
AAITRTDIYD FLVDIIPRDD MKEEGLGLPR VGLPPAALGA PADAYPPYYY VPAQQVPGVG  240
MMYGGQQGHP VAYAWQQPQG QQAEEAPEEQ QQSPSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171177RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.14e-65NF-YC family protein