PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG027420.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 255aa MW: 28204.8 Da PI: 9.9387 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 105.8 | 3e-33 | 1 | 64 | 15 | 78 |
-HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 15 keyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 keyhr+h+vCe+h+k+p v+v+g+e+rfCqqCsrfh lsefD++krsCrrrL++hn+rrrk+q+ TRIDC6BG027420.2 1 KEYHRKHRVCEAHTKSPRVVVAGQERRFCQQCSRFHGLSEFDQKKRSCRRRLSDHNARRRKPQP 64 89***********************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
KEYHRKHRVC EAHTKSPRVV VAGQERRFCQ QCSRFHGLSE FDQKKRSCRR RLSDHNARRR 60 KPQPDAFSFA PARLPSSLMF DDRRQISFVW NKDPLSHGRP FPCSPWDSPS DFKLPQVKEI 120 REVSINGQVH FDKSHLPNAV PALSHDIPEL LPMKGPDASV TASKLGGAPD LQRALSLLSA 180 SSCGLPDPVQ QASCLVQFTG ASQNSRGPSP HGGSPPSVSC AEGQPMAPSP QFVRFTMDGA 240 SSGYESTFFG VNRMN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 44 | 61 | KKRSCRRRLSDHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 2e-36 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG027420.2 |