PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG027390.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 291aa MW: 30342.4 Da PI: 4.6185

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG027390.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.7	3.5e-09	78	157	1	71
trihelix 1 rWtkqevlaLiearremeerlr.rgklkkplWeevskkm........rergferspkqCkekwenlnkrykkikegekkr 71 +Wt e+laL++a+ ++++ r+ ++ ++W+ v++++ +r r + +Ck +we l +y +++++e++ TRIDC6BG027390.3 78 EWTAAETLALVAAVAAVDDDGWaRSVSAFQKWAIVAENIafsdaggaPSRRRGRAAGECKRRWEALVAEYGAVRRWEGRT 157 5************99988772577999**********99996666679*********************983 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MDPRGGDFPC IVQALPSVDP NEAASDSPCI VQALAASPSP SPSKALALTP AARDQPPPAF 60 KSSRPPSPRR TRSGRAPEWT AAETLALVAA VAAVDDDGWA RSVSAFQKWA IVAENIAFSD 120 AGGAPSRRRG RAAGECKRRW EALVAEYGAV RRWEGRTGGS YWRMSAAARR KAGLPAEFDA 180 EVYGIMDALI RVDEALLGGA GGGGGDEGLV SANGGAGDTA EVGEEKGGDA GVEEEEEADG 240 DGSEEEMRVD DENAANASDD LVAVLHAWLG SHGVRWRPTT NQRKAKPTHG S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	8e-14	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG027390.3