PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG026140.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 355aa MW: 38772.3 Da PI: 7.9394

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG026140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.2	2.2e-30	195	254	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ k++++pr+Y+rC++a gCpvkkkv+rsaed+++++ tYegeHnh+ TRIDC6BG026140.1 195 VKDGYQWRKYGQKVTKDNPCPRAYFRCSFApGCPVKKKVQRSAEDKTILVATYEGEHNHS 254 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MDPWVSSQPS LSLDLHVGLP PMGHPHSHHQ AAPMVALAKP KVLVEENFMQ LKKDPEVAVL 60 ESELQRVSEE NRRLGEMLRE VASKYETLQG QFTDMVTAGA HAGGNNHYNN QPSSASEGGS 120 VSPSRKRKSE ESNGTPPPSH QQQQQHYAGG LAYAAAPDQA ECTSGEPCKR IREECKPVIS 180 KRYVHADPAD LSLVVKDGYQ WRKYGQKVTK DNPCPRAYFR CSFAPGCPVK KKVQRSAEDK 240 TILVATYEGE HNHSQPPSSQ PQQQNDGSGA GKNAGKPPQA PATPHHPQQH QQQHKQEAPA 300 VAVSGESAAA ESEMIRRNLA EQMAMTLTRD PSFKAALVTA LSGRILELSP TRDIN

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MDPWVSSQPS LSLDLHVGLP PMGHPHSHHQ AAPMVALAKP KVLVEENFMQ LKKDPEVAVL  60
ESELQRVSEE NRRLGEMLRE VASKYETLQG QFTDMVTAGA HAGGNNHYNN QPSSASEGGS  120
VSPSRKRKSE ESNGTPPPSH QQQQQHYAGG LAYAAAPDQA ECTSGEPCKR IREECKPVIS  180
KRYVHADPAD LSLVVKDGYQ WRKYGQKVTK DNPCPRAYFR CSFAPGCPVK KKVQRSAEDK  240
TILVATYEGE HNHSQPPSSQ PQQQNDGSGA GKNAGKPPQA PATPHHPQQH QQQHKQEAPA  300
VAVSGESAAA ESEMIRRNLA EQMAMTLTRD PSFKAALVTA LSGRILELSP TRDIN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	129	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31800.2	7e-42	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG026140.1