PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG026040.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 630aa MW: 68636.5 Da PI: 8.3331 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.5 | 6.1e-28 | 208 | 261 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ +t+e+v+SHLQkYRl TRIDC6BG026040.4 208 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVENITRENVASHLQKYRL 261 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 36.5 | 1.1e-11 | 210 | 260 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++ t++++ s++qky+ TRIDC6BG026040.4 210 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvENITRENVASHLQKYR 260 678***********************************************7 PP | |||||||
3 | Response_reg | 79.8 | 9.4e-27 | 30 | 138 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p+ +++l+++l++ +y +v+++ ++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+ge +++ + + TRIDC6BG026040.4 30 VLAVDDDPTCLKVLENLLRRCDY-HVTTTGQAATALRMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGIT 120 799********************.***************888889*******************87754.558******************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ e+l + TRIDC6BG026040.4 121 HGACDYLLKPVRLEQLKT 138 ***************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 630 aa Download sequence |
DTRRKMTVEG RVSGGGDGGG KDKFPVGMRV LAVDDDPTCL KVLENLLRRC DYHVTTTGQA 60 ATALRMLREN KDQFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG ETQTVMKGIT 120 HGACDYLLKP VRLEQLKTIW QHVIRRNTKN RGSDNDDAGQ KGPNAEGENG GANRNKRQSR 180 RDRDENGDDG DDSDENSNDN GDSSSQKKPR VVWSVELHRK FVAAVNQLGI DKAVPKKILD 240 LMNVENITRE NVASHLQKYR LYLKRMSMDA SRQANLVAAL GGRNPAYSNM NSMDVFRHYS 300 NTYGRYRPVP TSNHSQSNNL VARMNSPSAY GMHGLLSPQS QPLHLGHAQN NLGTSLNDLG 360 VNNGNLIRGA HMSTMVTGTS GNSFANISNG APLAPTNRAV QSLESNNRQH LGRINSSSTD 420 SFSSFASDSP HFPDLGRSSN TWQTAVPSNI QQLGQNGSMS QASLHGNGPR MEPVSSYAPP 480 SNQITSLGND MQNQVAPLAS NSLPMVFNQG AAPFTFGNST NSREALNSNL AFSNSGINIS 540 LPNLRIDNSV VPRQTLDGGN TGGVPSLQDG KIDQQAVGNQ LNYNNNDLVG TSGLQRELSG 600 GLDDIVVDMF RPMHVWRSIP FKIRCTFILV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-105 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG026040.4 |