PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG026040.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 622aa    MW: 67370.6 Da    PI: 6.5709
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG026040.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.66e-28203256155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ +t+e+v+SHLQkYRl
  TRIDC6BG026040.2 203 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVENITRENVASHLQKYRL 256
                       79*******************.********************************8 PP
2Myb_DNA-binding36.51.1e-11205255148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e++ ++v av+qlG +   +k+I   m+ ++ t++++ s++qky+
  TRIDC6BG026040.2 205 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvENITRENVASHLQKYR 255
                       678***********************************************7 PP
3Response_reg79.89.2e-27251331109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ +++l+++l++ +y +v+++ ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+ge +++ + + 
  TRIDC6BG026040.2  25 VLAVDDDPTCLKVLENLLRRCDY-HVTTTGQAATALRMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGIT 115
                       799********************.***************888889*******************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+  e+l +
  TRIDC6BG026040.2 116 HGACDYLLKPVRLEQLKT 133
                       ***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 622 aa     Download sequence    
MTVEGRVSGG GDGGGKDKFP VGMRVLAVDD DPTCLKVLEN LLRRCDYHVT TTGQAATALR  60
MLRENKDQFD LVISDVHMPD MDGFKLLELV GLEMDLPVIM LSANGETQTV MKGITHGACD  120
YLLKPVRLEQ LKTIWQHVIR RNTKNRGSDN DDAGQKGPNA EGENGGANRN KRQSRRDRDE  180
NGDDGDDSDE NSNDNGDSSS QKKPRVVWSV ELHRKFVAAV NQLGIDKAVP KKILDLMNVE  240
NITRENVASH LQKYRLYLKR MSMDASRQAN LVAALGGRNP AYSNMNSMDV FRHYSNTYGR  300
YRPVPTSNHS QSNNLVARMN SPSAYGMHGL LSPQSQPLHL GHAQNNLGTS LNDLGVNNGN  360
LIRGAHMSTM VTGTSGNSFA NISNGAPLAP TNRAVQSLES NNRQHLGRIN SSSTDSFSSF  420
ASDSPHFPDL GRSSNTWQTA VPSNIQQLGQ NGSMSQASLH GNGPRMEPVS SYAPPSNQIT  480
SLGNDMQNQV APLASNSLPM VFNQGAAPFT FGNSTNSREA LNSNLAFSNS GINISLPNLR  540
IDNSVVPRQT LDGGNTGGVP SLQDGKIDQQ AVGNQLNYNN NDLVGTSGLQ RELSGGLDDI  600
VVDMFRPDND NGGIFDTDWG LV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-106ARR-B family protein