PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG024760.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 930aa    MW: 103197 Da    PI: 6.1242
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG024760.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.31.4e-23139240199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d++g++W++++i+r++++r++lt+GW+ F +a++L +gD+v+F   +
  TRIDC6BG024760.8 139 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftQQPPAQ--ELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSIFISAKRLVAGDSVLFI--W 227
                       99*****************************86555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC6BG024760.8 228 NDNNQLLLGIRRA 240
                       777778**99997 PP
2Auxin_resp120.61.2e-39265348183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+seFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdldp rWpnS+Wrs+k
  TRIDC6BG024760.8 265 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVK 348
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 930 aa     Download sequence    
LLLLVGCRNH FSELGCRITI FPFSVSEEHK CLNSELWHAC AGPLVSLPAV GSRVLYFPQG  60
HSEQVSASTN KEMESQIPNY PNLPAQLICQ LHNVTMHADA ETDEVYAQMT LQPLSPQELK  120
DPFLPAELGN ASKQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDF TQQPPAQELM  180
AKDLHGNEWK FRHIFRGQPK RHLLTTGWSI FISAKRLVAG DSVLFIWNDN NQLLLGIRRA  240
NRSQTVMPSS VLSSDSMHIG LLAAAAHAAS TNSRFTIFYN PRASPSEFVI PLAKYVKAVY  300
HTRISVGMRF RMLFETEESS VRRYMGTITG ISDLDPARWP NSHWRSVKVG WDESTAGERQ  360
PRVSLWEIEP LTTYPMYSSP FPMRLKRPWP TGLPSLYGGK EDDLTSSLMW LRDGANPGFQ  420
SFNFGGLGMS PWMQPRMDSS LLGLQPDMYQ AMSAAAFQNT TKQVSPTLLQ FQQPQNIAGR  480
SALLSSQILQ QVQPQFQEMH HQNINDSAIQ GHNQPEYLQQ QLQRCQSFNG QKSPLPQQQE  540
SHHQHQQQQS QCMQTPQHQQ MQEQKHSPDF QCVPNGLSVF SQLSSTNQSP PSTLQTVSAF  600
SQQQNLQDRN ISSLSPSNIP SMHDTLRPFP SEAGSNLQGV PRTTPLPVSD PWSSKRVAME  660
SVIPSSSHVN SSHIQQLDSA PSNIPQSSSL APLPGRECLV DQDGNSDNQN HLLFGVNIDS  720
QSLLMQGGIP SLQEDNGCIA SLQDDNDSST IPYSTCNFLS PSQNDFPLNE ALASSGCLDE  780
SGYASFSENS DHVNQSTAAF VKVYKSGTFG RLLDITKFSS YHELRSEVGH LFGLEGQLED  840
PARSGWQLVF VDREDDILLV GDDPWQEFVN SVSCIKILTP QEVQQMGKQG IDLLSSAPAR  900
MLGNSCDNYA GRQESRSLST VIASVGSVEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.20.0ARF family protein